F11 - BIOL119.A - Genomics & Systems Biology(1)

Topic outline

• 

  General

  • News forum
  • Library course guide URL
• 

  Topic 1

  Course Documents

  • Syllabus File
  • Wikipedia assignment File
  • Presentation and food schedule (second half) File
  • Presentation (first half) and food schedule File
  • Nick's ideas on giving a good talk about a research paper File
  • How to give an academic talk URL
  • How to read primary literature File
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  Topic 2

  Lab resources

  • Illumina sequencing Page
  • The Chickpea transcriptome paper - our practice data set URL
  • Trinity assemblies Folder
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  Topic 3

  • Discussions of assembly and annotation plans Campus Pack Wiki
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  Topic 4

  Week 2: Using genetic interaction maps to understand protein and protein complex function

  • Week 2 readings Folder
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  Topic 5

  Week 4: Expression profiling as a tool for understanding cancer

  • Week 4 readings Folder
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  Topic 6

  Week 5: Genomics and metagenomics as tools for characterizing diversity and discovering function

  • Week 5 readings Folder
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  Topic 7

  Week 6: RNAi as a tool for genome wide reverse genetics

  • Week 6 readings Folder
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  Topic 8

  Week 6b: The biology of turtles

  • Readings for Scott Gilbert's presentation Folder
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  Topic 9

  Week 7: Transposons and the evolution of regulatory circuits

  • Week 7 readings Folder
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  Topic 10

  Week 8: Comparative genomics as a tool for asking questions about human evolution

  • Week 8 readings Folder
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  Topic 11

  Week 9 (10.31) - Global insights into epigenetics

  • Week 9 readings Folder
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  Topic 12

  Week 10: More epigenetic regulation of gene expression on a global scale

  • Week 10 readings Folder
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  Topic 13

  Week 11: The human microbiome

  • Week 11 readings Folder
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  Topic 14

  Week 12: Immunomics

  • Week 12 readings Folder
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  Topic 15

  Week 13: Genomic insights into plant evolution

  • Week 13 readings Folder