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BIOL115E.A.F10
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F10 - BIOL115E.A - Plant Mol Genetics Biotech
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FALL 2010
BIOL115E.A.F10
Topic 2
DNA sequencing at Yale
DNA sequencing at Yale
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http://dna-analysis.research.yale.edu/
link to open resource.
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Gateway cloning
WMD3 amiRNA design tools
Gene silencing using amiRNAs
pFAST vectors
amiRNA gene synthesis scheme
List of heat induced genes in Arabidopsis from TPJ 41:1 (2005)
First round of sequencing results
Summary of first round of sequencing
Phytoremediation of Mercury and Organomercurials in Chloroplast Transgenic Plants: Enhanced Root Uptake, Translocation to Shoots, and Volatilization, Hussein et al., 2007
Transgenic Indian Mustard Overexpressing Selenocysteine Lyase or Selenocysteine Methyltransferase Exhibit Enhanced Potential for Selenium Phytoremediation under Field Conditions, Banuelos et al., 2007
Phytoremediation, Pilon-Smits 2005
Prospects for developing perennial grain crops, Cox et al., 2006
PEP1 regulates perennial flowering in Arabis alpina, Wang et al., 2009
A single chromosome addition from Thinopyrum elongatum confers a polycarpic, perennial habit to annual wheat, Lammer et al., 2004
Investigating the mechanisms of glyphosate resistance in Lolium multiflorum, Perez-Jones et al., 2007
The Site of the Inhibition of the Shikimate Pathway by Glyphosate, Amrhein et al., 1980
Evolved Glyphosate Resistance in Plants: Biochemical and Genetic Basis of Resistance, Powles and Preston, 2006
Genetic Analysis of the Morphological Differences Between Maize and Teosinte. Doebley and Stec, 1991
fw2.2: A Quantitative Trait Locus Key to the Evolution of Tomato Fruit Size, Frary et al., 2000
Status and Prospects of Association Mapping in Plants, Zhu et al., 2008
Genetic design and statistical power of nested association mapping in Maize, Yu et al., 2008
Improving the nutritional value of Golden Rice through increased pro-vitamin A content, Paine et al., 2005
Natural Genetic Variation in Lycopene Epsilon Cyclase Tapped for Maize Biofortification, Harjes et al., 2008
Seed-Specific Overexpression of an Endogenous Arabidopsis Phytoene Synthase Gene Results in Delayed Germination and Increased Levels of Carotenoids, Chlorophyll, and Abscisic Acid, Lindgren et al., 2003
Provitamin A Accumulation in Cassava (Manihot esculenta) Roots Driven by a Single Nucleotide Polymorphism in a Phytoene Synthase Gene, Welsch et al., 2010
Two Transcription Factors, DREB1 and DREB2, with an EREBP/AP2 DNA Binding Domain Separate Two Cellular Signal Transduction Pathways in Drought- and Low- Temperature-Responsive Gene Expression, Respectively, in Arabidopsis. Liu et al., 1998
Arabidopsis CBF3/DREB1A and ABF3 in Transgenic Rice Increased Tolerance to Abiotic Stress without Stunting Growth, Oh et al., 2005
Dual function of an Arabidopsis transcription factor DREB2A in water-stress-responsive and heat-stress-responsive gene expression. Sakuma et al., 2006
STRESS RESPONSE SUPPRESSOR1 and STRESS RESPONSE SUPPRESSOR2, Two DEAD-Box RNA Helicases That Attenuate Arabidopsis Responses to Multiple Abiotic Stresses., Kant et al., 2007
Does lignin modification affect feeding preference or growth performance of insect herbivores in transgenic silver birch, Tiimonen et al., 2005.
Combinatorial modification of multiple lignin traits in trees through multigene cotransformation, Li et al., 2003.
Direct Extraction of Photosynthetic Electrons from Single Algal Cells by Nanoprobing System, Ryu et al., 2010
Engineering photosynthetic light capture: impacts on improved solar energy to biomass conversion, Mussgnug et al., 2007
Plant genetic engineering for biofuel production: towards affordable cellulosic ethanol, Sticklen 2008. (optional)
Lignin modification improves fermentable sugar yields for biofuel production, Chen and Dixon, 2007
Multi-site genetic modulation of monolignol biosynthesis suggests new routes for formation of syringyl lignin and wallbound ferulic acid in alfalfa (Medicago sativa L.), Chen et al., 2006
Transgenics are imperative for biofuel crops, Gressel 2008.
Plant regeneration through the direct induction of shoot buds, Kumar and Reddy, 2010.
An Arabidopsis Brassinosteroid-Dependent Mutant Is Blocked in Cell Elongation, Azpiroz et al., 1998.
Alanine aminotransferase catalyses the breakdown of alanine after hypoxia in Arabidopsis thaliana, Miyashita et al., 2007
Engineering nitrogen use efficiency with alanine aminotransferase, Good et al., 2007
Increased nitrogen-use efficiency in transgenic rice plants over-expressing a nitrogen-responsive early nodulin gene identified from rice expression profiling, Bi et al., 2009
Dg93, a Nodule-Abundant mRNA of Datisca glomerata with Homology to a Soybean Early Nodulin Gene, Okabura et al., 2000
Herbivore-Induced Callose Deposition on the Sieve Plates of Rice: An Important Mechanism for Host Resistance, Hao et al., 2008
Identification and characterization of Bph14, a gene conferring resistance to brown planthopper in rice, Du et al., 2009
A biochemical framework for RNA silencing in plants, Tang et al., 2003
Stability of gene silencing-based resistance to Plum pox virus in transgenic plum (Prunus domestica L.) under field conditions, Hily et al., 2004
Transgenic pollen harms monarch larvae. Losey et al., 1999
Field deposition of Bt transgenic corn pollen: lethal effects on the monarch butterfly. Jesse and Obrycki, 2000
The case of the monarch butterfly: a verdict is returned. Gatehouse et al., 2002
Effects of exposure to event 176 Bacillus thuringiensis corn pollen on monarch and black swallowtail caterpillar under field conditions. Zangerl et al., 2001
Assessing the impact of Cry1Ab-expressing corn pollen on monarch butterfly larvae in field studies. Stanley-Horn et al., 2001
Impact of Bt corn pollen on monarch butterfly populations: A risk assessment. Sears et al., 2001
Corn pollen deposition on milkweeds in and near cornfields. Pleasants et al., 2001
Temporal and spatial overlap between monarch larvae and corn pollen. Oberhasuer et al., 2001
Monarch larvae sensitivity to Bacillus thuringiensis-purified proteins and pollen. Hellmich et al., 2001
Assessing environmental risks of transgenic plants. Andow and Zwahlen, 2006
Greenhouse gas mitigation by agricultural intensification. Burney et al., 2010
Increasing crop productivity to meet global needs for feed, food, and fuel. Edgerton 2009.
Marker assisted selection
Besting Johnny Appleseed - using biotechnology in fruit breeding
Food and ecosystem security via perennial grains
Cell walls as biofuel feedstocks
Gateway cloning ►